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Generation of HIV‐1‐Based Lentiviral Vector Particles

Ali Ramezani1,  Robert G. Hawley1,2

1American Red Cross, Rockville, Maryland
2The George washington University, Washington, D.C.


Unit Number: 
Unit 16.22
DOI: 
10.1002/0471142727.mb1622s60
Online Posting Date: 
November, 2002
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Abstract

This unit presents protocols outlining the methodology and techniques involved in the construction and application of HIV-1-based lentiviral vector systems. Also described are procedures that can be used to concentrate and purify high-titer recombinant lentiviral vector preparations, as well as protocols for transduction of adherent and suspension cells.

     
 
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Table of Contents

  • Unit Introduction
  • Basic Protocol 1: Cotransfection of 293T Cells and Production of Lentiviral Vector Supernatants
  • Basic Protocol 2: Stimulation of Vector Particle Production Using Sodium Butyrate
  • Basic Protocol 3: Concentration of HIV-1 Vector Particles by Ultracentrifugation
  • Alternate Protocol 1: Concentration of HIV-1 Vector Particles by Poly-L-Lysine Precipitation
  • Basic Protocol 4: Purification of Concentrated Lentiviral Vector Particles by Anion-Exchange Chromatography
  • Alternate Protocol 2: Purification of Concentrated Lentiviral Vector Particles by the Dual-Filter Method
  • Basic Protocol 5: Titration of Lentiviral Vector Stocks
  • Basic Protocol 6: Detection of Replication-Competent Viruses by the Reverse Transcriptase Assay
  • Alternate Protocol 3: Detection of Replication-Competent Viruses by the Tat-Induction Assay
  • Alternate Protocol 4: Detection of Replication-Competent Viruses by the Gag Transfer Assay
  • Basic Protocol 7: Transduction of Target Cells
  • Reagents and Solutions
  • Commentary
  • Literature Cited
     
 
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Materials

Basic Protocol 1: Cotransfection of 293T Cells and Production of Lentiviral Vector Supernatants

 Materials
  • 293T human embryonic kidney cell line (ATCC #CRL-11268)
  • 293T cell growth medium (see recipe) with and without 10 mM HEPES [add HEPES from 100× (1 mM) stock (see recipe)]
  • Lentiviral vector plasmid DNA containing the gene of interest (see UNIT 16.21; Ramezani et al., 2000; Vigna and Naldini, 2000)
  • Lentiviral packaging construct DNA (e.g., pCMVR8.91; Zufferey et al., 1997)
  • VSV-G expressing plasmid DNA (e.g., pMD.G; Naldini et al., 1996)
  • 2.5 M CaCl2 (see recipe)
  • 2× HEPES-buffered saline (HeBS; see recipe)
  • Phosphate-buffered saline (PBS; APPENDIX 2)
  • 100-mm tissue culture dishes
  • Tabletop centrifuge
  • 0.45-µm pore-size filter

Additional reagents and equipment for cell culture and counting cells (APPENDIX 3F)

Basic Protocol 2: Stimulation of Vector Particle Production Using Sodium Butyrate

 Materials
  • Cells containing calcium phosphate–DNA coprecipitate (see Basic Protocol 1, step )
  • 500 mM sodium butyrate stock solution (see recipe)
  • 293T cell growth medium (see recipe)
  • Phosphate-buffered saline (PBS; APPENDIX 2)
  • Additional reagents and equipment for contransfection of 293T cells and preparation of lentiviral supernatants (see Basic Protocol 1)

Basic Protocol 3: Concentration of HIV-1 Vector Particles by Ultracentrifugation

 Materials
  • Vector-containing supernantants (see Basic Protocols 1 and 2)
  • Appropriate medium to resuspend concentrated vector particles
  • Ultracentrifuge and rotor
  • Polycarbonate 70-ml ultracentrifuge bottles and caps
  • Tabletop centrifuge

Alternate Protocol 1: Concentration of HIV-1 Vector Particles by Poly-L-Lysine Precipitation

 Additional Materials (also see Basic Protocol 3)
  • 100 mg/ml poly-L-lysine hydrobromide (PLL; mol. wt. based on viscosity, 27,400) in PBS (see APPENDIX 2 for PBS), freshly prepared
  • Appropriate medium to resuspend concentrated vector particles
  • 250-ml centrifuge bottles

Basic Protocol 4: Purification of Concentrated Lentiviral Vector Particles by Anion-Exchange Chromatography

 Materials
  • Vector particles concentrated by ultracentrifugation (see Basic Protocol 3), resuspended in PBS
  • Phosphate-buffered saline (PBS; APPENDIX 2) containing 1 M NaCl
  • 80 × 6–mm anion-exchange column: Fractoflow 80-6 column (Merck) packed with 40- to 90-µm mesh size resin according to manufacturer's instructions (also see UNIT 10.10)
  • Ultrafree-15 centrifugal filter devices (Millipore; 100,000 MWCO; also see APPENDIX 3C)

Alternate Protocol 2: Purification of Concentrated Lentiviral Vector Particles by the Dual-Filter Method

 Materials
  • Vector supernantants concentrated by ultracentrifugation (see Basic Protocol 3)
  • Appropriate serum-free medium
  • 10-ml syringes and 0.22-µm syringe filters
  • Ultrafree-15 centrifugal filter devices (Millipore; 100,000 MWCO; also see APPENDIX 3C)

Basic Protocol 5: Titration of Lentiviral Vector Stocks

 Materials
  • HT1080 cell line (ATCC #CCL-121)
  • 293T cell growth medium (see recipe)
  • Vector preparations (Basic Protocols 3 or 4 or Alternates Protocol 1 or 2)
  • 6 mg/ml (1000×) polybrene stock solution
  • G418 (UNIT 9.5)
  • 0.3% (w/v) crystal violet in 70% (v/v) methanol
  • 6-well tissue culture plates
  • Additional reagents and equipment for flow cytometric analysis of EGFP expression (Rasko, 1999), Xgal staining for lacZ (-galactosidase) expression (UNIT 9.10), or enumeration of neo-resistant cells (UNIT 9.5)

Basic Protocol 6: Detection of Replication-Competent Viruses by the Reverse Transcriptase Assay

 Materials
  • HT1080 cell line (ATCC #CCL-121)
  • Undiluted vector particle supernatant (Basic Protocols 3 or 4 or Alternates Protocol 1 or 2)
  • 293T cell growth medium (see recipe)
  • 35-, 100-, and 150-mm tissue culture dishes
  • Tabletop centrifuge
  • Ultracentrifuge and rotor
  • Reverse transcriptase assay kit (e.g., Roche Diagnostics, cat. no. 1468120)

Additional reagents and equipment for stable transduction of cells (see Basic Protocol 5, steps and )

Alternate Protocol 3: Detection of Replication-Competent Viruses by the Tat-Induction Assay

 Additional Materials (also see Basic Protocol 6)
  • CEM-GFP cell line (NIH AIDS Research and Reference Reagent Program)
  • Growth medium for CEM-GFP cells: IMDM containing 10% FBS (see recipe for serum-containing growth media for transduction)
  • 6 mg/ml polybrene stock solution
  • HIV packaging plasmid DNA (e.g., pCMVR8.91)
  • Additional reagents and equipment for flow cytometric analysis of GFP expression (Rasko, 1999)

Alternate Protocol 4: Detection of Replication-Competent Viruses by the Gag Transfer Assay

 Additional Materials (also see Basic Protocol 6)
  • p24 ELISA assay kit (e.g., Alliance HIV-1 p24 ELISA kit from Perkin-Elmer Life Sciences; cat. no. NEK050001KT)
     
 
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Literature Cited

Literature Cited
    Adam, M.A., Ramesh, N., Miller, A.D., and Osborne, W.R. 1991. Internal initiation of translation in retroviral vectors carrying picornavirus 5¢ nontranslated regions. J. Virol., 65:4985-4990.
    Bahnson, A.B., Dunigan, J.T., Baysal, B.E., Mohney, T., Atchison, R.W., Nimgaonkar, M.T., Ball, E.D., and Barranger, J.A. 1995. Centrifugal enhancement of retroviral mediated gene transfer. J. Virol.Methods. 54:131-143.
    Bevis, B.J. and Glick, B.S. 2002. Rapidly maturing variants of the Discosoma red fluorescent protein (DsRed). Nature Biotechnol. 20:83-87.
    Case, S.S., Price, M.A., Jordan, C.T., Yu, X.J., Wang, L., Kohn, D.B., and Crooks, G.M. 1999. Stable transduction of quiescent CD34+CD38-human hematopoietic cells by HIV-1-based lentiviral vectors. Proc. Natl. Acad. Sci. U.S.A. 96:2988-2993.
    Chuck, A.S., Clarke, M.F., and Palsson, B.O. 1996. Retroviral infection is limited by Brownian motion. Hum. Gene Ther. 7:1527-1534.
    Dao, M.A., Hashino, K., Kato, I., and Nolta, J.A. 1998. Adhesion to fibronectin maintains regenerative capacity during ex vivo culture and transduction of human hematopoietic stem and progenitor cells. Blood 92:4612-4621.
    Donahue, R.E., Sorrentino, B.P., Hawley, R.G., An, D.S., Chen, I.S., and Wersto, R.P. 2001. Fibronectin fragment CH-296 inhibits apoptosis and enhances ex vivo gene transfer by murine retrovirus and human lentivirus vectors independent of viral tropism in nonhuman primate CD34+ cells. Mol. Ther. 3:359-367.
    DuBridge, R.B., Tang, P., Hsia, H.C., Leong, P.M., Miller, J.H., and Calos, M.P. 1987. Analysis of mutation in human cells by using an Epstein-Barr virus shuttle system. Mol. Cell Biol. 7:379-387.
    Gasmi, M., Glynn, J., Jin, M.-J., Jolly, D.J., Yee, J.-K., and Chen, S.-T. 1999. Requirements for efficient production and transduction of human immunodeficiency virus type 1-based vectors. J. Virol. 73:1828-1834.
    Gervaix, A., West, D., Leoni, L.M., Richman, D.D., Wong-Staal, F., and Corbeil, J. 1997. A new reporter cell line to monitor HIV-1 infection and drug susceptibility in vitro. Proc. Natl. Acad. Sci. U.S.A. 94:4653-4658.
    Ghattas, I.R., Sanes, J.R., and Majors, J.E. 1991. The encephalomyocarditis virus internal ribosome entry site allows efficient coexpression of two genes from a recombinant provirus in cultured cells and in embryos. Mol. Cell Biol. 11:5848-5859.
    Gorman, C.M. and Howard, B.H. 1983. Expression of recombinant plasmids in mammalian cells is enhanced by sodium butyrate. Nucleic Acids Res 11:7631-7648.
    Graham, F.L. and van der Eb, A.J. 1973. Transformation of rat cells by DNA of human adenovirus 5. Virology 54:536-539.
    Graham, F.L., Smiley, J., Russell, W.C., and Nairn, R. 1977. Characteristics of a human cell line transformed by DNA from human adenovirus type 5. J. Gen. Virol. 36:59-74.
    Haas, D.L., Case, S.S., Crooks, G.M., and Kohn, D.B. 2000. Critical factors influencing stable transduction of human CD34+ cells with HIV-1-derived lentiviral vectors. Mol. Ther. 2:71-80.
    Hanenberg, H., Hashino, K., Konishi, H., Hock, R.A., Kato, I., and Williams, D.A. 1997. Optimization of fibronectin-assisted retroviral gene transfer into human CD34+ hematopoietic cells. Hum. Gene Ther. 8:2193-2206.
    Hawley, T.S., Sabourin, L.A., and Hawley, R.G. 1989. Comparative analysis of retroviral vector expression in mouse embryonal carcinoma cells. Plasmid 22:120-131.
    Hawley, T.S., Telford, W.G., and Hawley, R.G. 2001a. “Rainbow” reporters for multispectral marking and lineage analysis of hematopoietic stem cells. Stem Cells 19:118-124.
    Hawley, T.S., Telford, W.G., Ramezani, A., and Hawley, R.G. 2001b. Four-color flow cytometric detection of retrovirally expressed red, yellow, green and cyan fluorescent proteins. BioTechniques 30:1028-1034.
    Higashikawa, F. and Chang, L. 2001. Kinetic analyses of stability of simple and complex retroviral vectors. Virology 280:124-131.
    Jang, S.K. and Wimmer, E. 1990. Cap-independent translation of encephalomyocarditis virus RNA: Structural elements of the internal ribosomal entry site and involvement of a cellular 57-kD RNA-binding protein. Genes Dev. 4:1560-1572.
    Klages, N. Zufferey, R., and Trono, D. 2000. A stable system for the high-titer production of multiply attenuated lentiviral vectors. Mol. Ther. 2:170-176.
    Kotani, H., Newton III, P.B., Zhang, S., Chiang, Y. L., Otto, E., Weaver, L., Blaese, R.M., Anderson, W.F., and McGarrity, G.J. 1994. Improved methods of retroviral vector transduction and production for gene therapy. Hum. Gene Ther. 5:19-28.
    Laughlin, M.A., Chang, G.Y., Oakes, J.W., Gonzalez-Scarano, F., and Pomerantz, R.J. 1995. Sodium butyrate stimulation of HIV-1 gene expression: A novel mechanism of induction independent of NF- B. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 9:332-339.
    Liu, M.L., Winther, B.L., and Kay, M.A. 1996. Pseudotransduction of hepatocytes by using concentrated pseudotyped vesicular stomatitis virus G glycoprotein (VSV-G)-Moloney murine leukemia virus-derived retrovirus vectors: Comparison of VSV-G and amphotropic vectors for hepatic gene transfer. J. Virol. 70:2497-2502.
    Matz, M.V., Fradkov, A.F., Labas, Y.A., Savitsky, A.P., Zaraisky, A.G., Markelov, M.L., and Lukyanov, S.A. 1999. Fluorescent proteins from nonbioluminescent Anthozoa species. Nature Biotech. 17:969-973.
    McKnight, G.S., Hager, L., and Palmiter, R.D. 1980. Butyrate and related inhibitors of histone deacetylation block the induction of egg white genes by steroid hormones. Cell 22:469-477.
    Miller, D.L., Meikle, P.J., and Anson, D.S. 1996. A rapid and efficient method for concentration of small volumes of retroviral supernatant. Nucleic Acids Res. 24:1576-1577.
    Miyoshi, H., Smith, K.A., Mosier, D.E., Verma, I.M., and Torbett, B.E. 1999. Transduction of human CD34+ cells that mediate long-term engraftment of NOD/SCID mice by HIV-1 vectors. Science 283:682-686.
    Morgan, J.R., LeDoux, J.M., Snow, R.G., Tompkins, R.G., and Yarmush, M.L. 1995. Retrovirus infection: Effect of time and target cell number. J. Virol. 69:6994-7000.
    Moritz, T., Patel, V.P., and Williams, D.A. 1994. Bone marrow extracellular matrix molecules improve gene transfer into human hematopoietic cells via retroviral vectors. J. Clin. Invest. 93:1451-1457.
    Naldini, L., Blomer, U., Gallay, P., Ory, D., Mulligan, R., Gage, F.H., Verma, I.M., and Trono, D. 1996. In vivo gene delivery and stable transduction of nondividing cells by a lentiviral vector. Science 272:263-267.
    Norton, V.G., Imai, B.S., Yau, P., and Bradbury, E.M. 1989. Histone acetylation reduces nucleosome core particle linking number change. Cell 57:449-457.
    Ramezani, A., Hawley, T.S., and Hawley, R.G. 2000. Lentiviral vectors for enhanced gene expression in human hematopoietic cells. Mol. Ther. 2:4588-469.
    Rasheed, S., Nelson-Rees, W.A., Toth, E.M., Arnstein, P., and Gardner, M.B. 1974. Characterization of a newly derived human sarcoma cell line (HT-1080). Cancer 33:1027-1033.
    Rasko, J.E.J. 1999. Reporters of gene expression: Autofluorescent proteins. In Current Protocols in Cytometry (J.P. Robinson, Z. Darzynkiewicz, P.N. Dean, A.R. Hibbs, A. Orfao, P.S. Rabinovich, and L.L. Wheeless, eds.) pp. 9.12.1-9.12.16. John Wiley & Sons, New York.
    Sambrook, J. and Russell, D. 2001. Molecular Cloning: A Laboratory Manual, 3rd. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
    Scherr, M., Battmer, K., Blomer, U., Schiedlmeier, B., Ganser, A., Grez, M., and Eder, M. 2002. Lentiviral gene transfer into peripheral blood-derived CD34+ NOD/SCID-repopulating cells. Blood 99:709-712.
    Soneoka, Y., Cannon, P.M., Ramsdale, E.E., Griffiths, J.C., Romano, G., Kingsman, S.M., and Kingsman, A.J. 1995. A transient three-plasmid expression system for the production of high titer retroviral vectors. Nucleic Acids Res. 23:62-633.
    Vigna, E. and Naldini, L. 2000. Lentiviral vectors: Excellent tools for experimental gene transfer and promising candidates for gene therapy. J. Gene Med. 2:308-316.
    Yokota, T., Oritani, K., Mitsui, H., Aoyama, K., Ishikawa, J., Sugahara, H., Matsumura, I., Tsai, S., Tomiyama, Y., Kanakura, Y., and Matsuzawa, Y. 1998. Growth-supporting activities of fibronectin on hematopoietic stem/progenitor cells in vitro and in vivo: Structural requirement for fibronectin activities of CS1 and cell-binding domains. Blood 91:3263-3272.
    Zhang, B., Xia, H.Q., Cleghorn, G., Gobe, G., West, M., and Wei, M.Q. 2001. A highly efficient and consistent method for harvesting large volumes of high-titre lentiviral vectors. Gene Ther. 8:1745-1751.
    Zufferey, R., Nagy, D., Mandel, R.J., Naldini, L., and Trono, D. 1997. Multiply attenuated lentiviral vector achieves efficient gene delivery in vivo. Nat. Biotechnol. 15:871-875.
     
 
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